Squashed commit of the following:

commit 3dbe798285f95dc63ae33739df5daadb8c432f24
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 16:20:25 2012 -0800

    putting the color panel on top when opening ninja

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit b5ae7f0babb185051242df47634e24ad7a68f60e
Merge: 20d4f1d 2bc8343
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 16:15:44 2012 -0800

    Merge branch 'nested-selection' of https://github.com/mencio/ninja-internal into integration-candidate

    Conflicts:
    	js/ninja.reel/ninja.html

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit 2bc834334a3197ab7cffacc7332eafd1b52443d1
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 16:11:42 2012 -0800

    revert changes to the timeline

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit ae96ea66acc4be873fb7fb73fb3f4484b6db3eb8
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 16:03:32 2012 -0800

    adding some margin to the bread crumb buttons

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit 20d4f1d703c004dd7f869576b6c471b3fb5b5d3e
Merge: ee52f19 557c4d3
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 16:02:37 2012 -0800

    Merge pull request #81 from ananyasen/integration-candidate

    persist selections while switching documents

commit 557c4d3100ccde51b925b71f0650b2c783a4a042
Author: Ananya Sen <Ananya.Sen@motorola.com>
Date:   Tue Feb 28 16:02:15 2012 -0800

    minor fix for handling selections on switch document

    Signed-off-by: Ananya Sen <Ananya.Sen@motorola.com>

commit a230f0cd065613a1bc933e3d6d3f7e77f52bec04
Author: Ananya Sen <Ananya.Sen@motorola.com>
Date:   Tue Feb 28 15:48:55 2012 -0800

    selection controller sets _isDocument = true if number of selections are 0, on switch document

    Signed-off-by: Ananya Sen <Ananya.Sen@motorola.com>

commit ee52f197d1eb53a5ff30b54b8df1d2b53014eb0e
Merge: 8e370cc da83f44
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 15:16:12 2012 -0800

    Merge pull request #80 from joseeight/FileIO-Build-Candidate

    Adding CSS <link> attributes support to I/O

commit 5ab7efb9949e486395659c383064a08821febdae
Author: Ananya Sen <Ananya.Sen@motorola.com>
Date:   Tue Feb 28 15:15:27 2012 -0800

    persist selections while switching documents

    Signed-off-by: Ananya Sen <Ananya.Sen@motorola.com>

commit da83f44b0ecf379b0950a88d1c378fbedb80e386
Merge: b799b7c 676b4e2
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Tue Feb 28 15:15:12 2012 -0800

    Merge branch 'refs/heads/integration-candidate' into FileIO-Build-Candidate

commit 8e370cc72aa85de594a5d55ae89947a70af414ca
Merge: 8de4002 676b4e2
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 15:08:48 2012 -0800

    Merge branch 'integration-candidate' of github.com:Motorola-Mobility/ninja-internal into integration-candidate

commit 8de40029442333114d81ac30a8886a995a3dc56b
Merge: b0b4d64 eb27ed3
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 15:08:18 2012 -0800

    Merge branch 'ToolFixes' of https://github.com/mqg734/ninja-internal into integration-candidate

commit eb27ed35bf282262843de13b00af89a2bceac53f
Merge: ea59626 7c9291a
Author: Nivesh Rajbhandari <mqg734@motorola.com>
Date:   Tue Feb 28 15:04:33 2012 -0800

    Merge branch 'refs/heads/ninja-internal' into ToolFixes

commit b799b7cf3a422f407045c52a4c6a61756d1ea096
Merge: f7c08fe 2ce9f65
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Tue Feb 28 15:03:38 2012 -0800

    Merge branch 'refs/heads/FileIO' into FileIO-Build-Candidate

commit 2ce9f65c3a34937928f08690606962af3085c74f
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Tue Feb 28 15:03:23 2012 -0800

    CSS attributes

    Setting up logic to include attributes in <link> for the <style> duplicates and add attributes created in Ninja back to <link> tag on save.

commit ea5962641519b9d32499c4440112e7fa821e3a79
Author: Nivesh Rajbhandari <mqg734@motorola.com>
Date:   Tue Feb 28 15:02:57 2012 -0800

    Fix for "jumping" issue when using the selection tool repeatedly.

    Signed-off-by: Nivesh Rajbhandari <mqg734@motorola.com>

commit 676b4e2d7091ac63ce06f51be686b902b940bfff
Merge: b0b4d64 f2ab699
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 14:55:17 2012 -0800

    Merge pull request #79 from pushkarjoshi/pentool

    Pentool

commit f2ab6999a9fdaa18056fb5a148ef1bcaefb7d854
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Tue Feb 28 14:53:33 2012 -0800

    reverting manifest name

commit 63307c9abf120985d979a40a53a0598d3f0d5c5a
Merge: e1a65d0 7c9291a
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Tue Feb 28 14:01:05 2012 -0800

    Merge branch 'master' into pentool

    Conflicts:
    	manifest.json

commit e1a65d0c2a13e12ee53be98c731616e35aa07a41
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Tue Feb 28 13:58:34 2012 -0800

    new anchor control guide rendering (smaller handles)

    and
    clamp min. width and height to 1 while resizing subpaths

commit b0b4d6492d6ddd3b7ab39c2f4d1c01b8e9bacfb6
Merge: 7cafa04 538db48
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 13:41:12 2012 -0800

    Merge pull request #78 from imix23ways/Timeline

    Timeline bug fixes

commit 933ed4c880128eed80bdc6372eb1dfdb23af4c37
Merge: 6af71de 7c9291a
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Tue Feb 28 13:33:45 2012 -0800

    Merge branch 'refs/heads/NinjaInternal' into FileIO

commit f7c08fe5a8424d8c7837a4e3a975e63bcddc3b14
Merge: 811d509 7c9291a
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Tue Feb 28 13:33:17 2012 -0800

    Merge branch 'refs/heads/NinjaInternal' into FileIO-Build-Candidate

commit 7cafa0464ee0c1621ffea04c2192f19008c9fc49
Merge: 2ab07cb 811d509
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 13:20:44 2012 -0800

    Merge branch 'FileIO-Build-Candidate' of https://github.com/joseeight/ninja-internal into integration-candidate

commit 2ab07cb8ac76a06606ce455bb2e6b4889e3ddc65
Merge: e5b1102 347fc28
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 13:19:52 2012 -0800

    Merge branch 'integration' of https://github.com/ericmueller/ninja-internal into integration-candidate

commit e5b1102f0cff7f5ba7074840ccf29dc1c02ced8e
Merge: 7c9291a a70c628
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 13:17:55 2012 -0800

    Merge branch 'ToolFixes' of https://github.com/mqg734/ninja-internal into integration-candidate

commit 347fc28227d822e9fea3fa823fae79cf14ea041c
Merge: ed16298 7c9291a
Author: hwc487 <hwc487@motorola.com>
Date:   Tue Feb 28 12:58:09 2012 -0800

    Merge branch 'master' of github.com:Motorola-Mobility/ninja-internal into integration

commit 7cbd26d475eaad817042692f9116f9a24ae60997
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Tue Feb 28 10:24:06 2012 -0800

    Bug fixes:

    1152: allow deleting of multiple paths from inside pen tool
    1128: keyboard hotkey shortcut 'P' for pen tool
    941: changing width or height of the path scales the path

commit ed16298e4323b733f6dc957c307dc07036fa3569
Merge: b194efa 6054d13
Author: hwc487 <hwc487@motorola.com>
Date:   Tue Feb 28 09:55:07 2012 -0800

    Merge branch 'master' of github.com:Motorola-Mobility/ninja-internal into integration

commit 19e94dc51a279501352a08d511b18144f83500e5
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Tue Feb 28 00:47:46 2012 -0800

    cleanup and fixing selecting each bread crumb

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit 6af71de5b80fd531901e82b12372446b569902d8
Merge: f872077 6054d13
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 21:44:45 2012 -0800

    Merge branch 'refs/heads/NinjaInternal' into FileIO

commit db5db0a92c1fb67eac262c33d4fbf776ceabbb3c
Author: Valerio Virgillito <valerio@motorola.com>
Date:   Mon Feb 27 21:17:29 2012 -0800

    breadcrumb cleanup and moving the resized on top of the timeline panel

    Signed-off-by: Valerio Virgillito <valerio@motorola.com>

commit a70c62891d0c7dd032d9382c50d1555ab81c4e33
Author: Nivesh Rajbhandari <mqg734@motorola.com>
Date:   Mon Feb 27 16:24:13 2012 -0800

    Fixing tooltips and keyboard shortcuts for 3d tools.

    IKNinja-1014 and IKNinja-1015.

    Signed-off-by: Nivesh Rajbhandari <mqg734@motorola.com>

commit ef38731ae2769dcb2247db599cdfe62d38e34b28
Author: Nivesh Rajbhandari <mqg734@motorola.com>
Date:   Mon Feb 27 15:39:16 2012 -0800

    Reset translation values as well when double-clicking to reset the rotation values.

    Signed-off-by: Nivesh Rajbhandari <mqg734@motorola.com>

commit 811d5092345bf520f6a683eec89cf7d8ed7aa490
Merge: ceba159 f872077
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:39:10 2012 -0800

    Merge branch 'refs/heads/FileIO' into FileIO-Build-Candidate

commit f872077e947916496235f4e871511ce890953d04
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:38:59 2012 -0800

    Updating legal copy

commit ceba159acedcaada47f990392b3bbebc2025e40a
Merge: a564d96 3e2889b
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:29:53 2012 -0800

    Merge branch 'refs/heads/FileIO' into FileIO-Build-Candidate

commit 3e2889b94d5e6af93ec0eaca114802e30c8c38ef
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:29:17 2012 -0800

    Updating credits

commit affdf784f3dae1febe279a214857e6fe3ba56db1
Merge: 7e63b5d 15d00c4
Author: Jose Antonio Marquez Russo <jose@eightyearproject.com>
Date:   Mon Feb 27 14:28:59 2012 -0800

    Merge pull request #21 from ananyasen/FileIO

    FileIO branch pull request

commit 15d00c49b522aa471d1ccfbbd33f5c0e721eb89e
Merge: 604ace9 7e63b5d
Author: Ananya Sen <Ananya.Sen@motorola.com>
Date:   Mon Feb 27 14:24:49 2012 -0800

    Merge branch 'refs/heads/FileIO-jose' into FileIO

commit a564d969ffcb7bc0dd701a1ef653f666ae857f77
Merge: c65eb4b 7e63b5d
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:11:09 2012 -0800

    Merge branch 'refs/heads/FileIO' into FileIO-Build-Candidate

commit 7e63b5d0b6990b6c0ec0385d35534b91982ac672
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Mon Feb 27 14:10:53 2012 -0800

    Cleaning up pretty functions in IO

commit b194efa0556806593b29eb197250df462e89fcc4
Author: hwc487 <hwc487@motorola.com>
Date:   Mon Feb 27 14:03:11 2012 -0800

    Enable shift key constraint for Pan Tool.

commit 124ad4709780013615d2ff1da05ace9887ee7709
Merge: a8bd158 8125c8c
Author: hwc487 <hwc487@motorola.com>
Date:   Mon Feb 27 13:41:31 2012 -0800

    Merge branch 'master' of github.com:Motorola-Mobility/ninja-internal into integration

commit a8bd1585ae83d4d304b9f9f41823bb3dcbff9e01
Author: hwc487 <hwc487@motorola.com>
Date:   Mon Feb 27 12:14:29 2012 -0800

    Color fix for line shapes.

commit 604ace9cfc9fae6b6c121259523a9060c5306161
Author: Ananya Sen <Ananya.Sen@motorola.com>
Date:   Mon Feb 27 11:59:58 2012 -0800

    - save show3DGrid flag per document while switching documents
    - fix zoom tool keyboard control to listen to Z when ctrl and shift keys are not pressed with it

    Signed-off-by: Ananya Sen <Ananya.Sen@motorola.com>

commit bfa895634324a78652f2a7eecf725d9c6030023f
Author: hwc487 <hwc487@motorola.com>
Date:   Mon Feb 27 11:58:44 2012 -0800

    Changed the hardcoded publish setting for a PI fix.

commit 8578322c60adaaf65f37ba96f2a0f7ed9de8e1dc
Author: hwc487 <hwc487@motorola.com>
Date:   Mon Feb 27 10:28:03 2012 -0800

    Fixed various rendering bugs.

commit 544dec04fd379b10eff254bbdd105bfaf828f8a5
Author: Jose Antonio Marquez <kgq387@motorola.com>
Date:   Sun Feb 26 12:12:22 2012 -0800

    Cleaning up and adding TODOs

commit 053fc63a2950c7a5ee4ebf98033b64d474a3c46e
Merge: a5ba66e 23a2219
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Fri Feb 24 12:03:51 2012 -0800

    Merge branch 'master' into pentool

commit a5ba66ecefa9c9c17e0f5e1725e2141f7a3540a2
Author: Pushkar Joshi <pushkar@motorola.com>
Date:   Fri Feb 24 12:01:03 2012 -0800

    adding unpacked to the manifest file (to differentiate from the ninjateam (main) chrome app)

commit d0661d6c587aced68a68e36a5ec4e81f8a2096e8
Author: hwc487 <hwc487@motorola.com>
Date:   Thu Feb 23 16:57:55 2012 -0800

    bug fixes for canvas 2d shape drawing.

Signed-off-by: Jonathan Duran <jduran@motorola.com>

7 files changed, 215 insertions, 152 deletions

diff --git a/js/helper-classes/RDGE/GLAnchorPoint.js b/js/helper-classes/RDGE/GLAnchorPoint.js
index 716f59d4..c3e95b34 100755
--- a/js/helper-classes/RDGE/GLAnchorPoint.js
+++ b/js/helper-classes/RDGE/GLAnchorPoint.js
@@ -133,6 +133,13 @@ GLAnchorPoint.prototype.translateAll = function (x, y, z) {
 }
 
 
+GLAnchorPoint.prototype.scaleAll = function(sx,sy,sz){
+    this._x *= sx;this._prevX *= sx;this._nextX *= sx;
+    this._y *= sy;this._prevY *= sy;this._nextY *= sy;
+    this._z *= sz;this._prevZ *= sz;this._nextZ *= sz;
+}
+
+
 // ********* getters **********
 GLAnchorPoint.prototype.getPosX = function () { return this._x; }
 GLAnchorPoint.prototype.getPosY = function () { return this._y; }
diff --git a/js/helper-classes/RDGE/GLCircle.js b/js/helper-classes/RDGE/GLCircle.js
index 712544c0..15ed6b6d 100755
--- a/js/helper-classes/RDGE/GLCircle.js
+++ b/js/helper-classes/RDGE/GLCircle.js
@@ -47,8 +47,8 @@ function GLCircle()
         
                         this._strokeWidth = strokeSize;
                         this._innerRadius = innerRadius;
-                        this._strokeColor = strokeColor;
-                        this._fillColor = fillColor;
+                        if (strokeColor)  this._strokeColor = strokeColor;
+                        if (fillColor)  this._fillColor = fillColor;
 
                         this._strokeStyle = strokeStyle;
                 }
@@ -398,59 +398,58 @@ function GLCircle()
                         // set up the fill style
                         ctx.beginPath();
                         ctx.lineWidth = 0;
-                        ctx.fillStyle   = "#990000";
                         if (this._fillColor)
                         {
                                 var c = "rgba(" + 255*this._fillColor[0] + "," + 255*this._fillColor[1] + "," + 255*this._fillColor[2] + "," + this._fillColor[3] + ")";  
                                 ctx.fillStyle = c;
-                        }
 
-                        // draw the fill
-                        ctx.beginPath();
-                        var p = MathUtils.transformPoint( bezPts[0],   mat );
-                        ctx.moveTo( p[0],  p[1] );
-                        var index = 1;
-                        while (index < n)
-                        {
-                                p0   = MathUtils.transformPoint( bezPts[index],  mat );
-                                p1 = MathUtils.transformPoint( bezPts[index+1],  mat );
+                                // draw the fill
+                                ctx.beginPath();
+                                var p = MathUtils.transformPoint( bezPts[0],   mat );
+                                ctx.moveTo( p[0],  p[1] );
+                                var index = 1;
+                                while (index < n)
+                                {
+                                        p0   = MathUtils.transformPoint( bezPts[index],  mat );
+                                        p1 = MathUtils.transformPoint( bezPts[index+1],  mat );
 
-                                x0 = p0[0];  y0 = p0[1];
-                                x1 = p1[0];  y1 = p1[1];
-                                ctx.quadraticCurveTo( x0,  y0,  x1, y1 );
-                                index += 2;
-                        }
+                                        x0 = p0[0];  y0 = p0[1];
+                                        x1 = p1[0];  y1 = p1[1];
+                                        ctx.quadraticCurveTo( x0,  y0,  x1, y1 );
+                                        index += 2;
+                                }
 
-                        if ( MathUtils.fpSign(innerRad) > 0)
-                        {
-                                xScale = 0.5*innerRad*this._width;
-                                yScale = 0.5*innerRad*this._height;
-                                mat[0] = xScale;
-                                mat[5] = yScale;
-
-                                // get the bezier points
-                                var bezPts = MathUtils.circularArcToBezier( Vector.create([0,0,0]), Vector.create([1,0,0]), -2.0*Math.PI );
-                                if (bezPts)
+                                if ( MathUtils.fpSign(innerRad) > 0)
                                 {
-                                        var n = bezPts.length;
-                                        p = MathUtils.transformPoint( bezPts[0],   mat );
-                                        ctx.moveTo( p[0],  p[1] );
-                                        index = 1;
-                                        while (index < n)
+                                        xScale = 0.5*innerRad*this._width;
+                                        yScale = 0.5*innerRad*this._height;
+                                        mat[0] = xScale;
+                                        mat[5] = yScale;
+
+                                        // get the bezier points
+                                        var bezPts = MathUtils.circularArcToBezier( Vector.create([0,0,0]), Vector.create([1,0,0]), -2.0*Math.PI );
+                                        if (bezPts)
                                         {
-                                                p0 = MathUtils.transformPoint( bezPts[index],    mat );
-                                                p1 = MathUtils.transformPoint( bezPts[index+1],  mat );
-
-                                                var x0 = p0[0],  y0 = p0[1],
-                                                        x1 = p1[0],  y1 = p1[1];
-                                                ctx.quadraticCurveTo( x0,  y0,  x1, y1 );
-                                                index += 2;
+                                                var n = bezPts.length;
+                                                p = MathUtils.transformPoint( bezPts[0],   mat );
+                                                ctx.moveTo( p[0],  p[1] );
+                                                index = 1;
+                                                while (index < n)
+                                                {
+                                                        p0 = MathUtils.transformPoint( bezPts[index],    mat );
+                                                        p1 = MathUtils.transformPoint( bezPts[index+1],  mat );
+
+                                                        var x0 = p0[0],  y0 = p0[1],
+                                                                x1 = p1[0],  y1 = p1[1];
+                                                        ctx.quadraticCurveTo( x0,  y0,  x1, y1 );
+                                                        index += 2;
+                                                }
                                         }
                                 }
-                        }
 
-                        // fill the path
-                        ctx.fill();
+                                // fill the path
+                                ctx.fill();
+                        }
 
                         // calculate the stroke matrix
                         xScale = 0.5*this._width  - 0.5*lineWidth;
@@ -461,35 +460,10 @@ function GLCircle()
                         // set up the stroke style
                         ctx.beginPath();
                         ctx.lineWidth   = lineWidth;
-                        ctx.strokeStyle = "#0000ff";
                         if (this._strokeColor)
                         {
                                 var c = "rgba(" + 255*this._strokeColor[0] + "," + 255*this._strokeColor[1] + "," + 255*this._strokeColor[2] + "," + this._strokeColor[3] + ")";  
                                 ctx.strokeStyle = c;
-                        }
-                        
-                        // draw the stroke
-                        p = MathUtils.transformPoint( bezPts[0],   mat );
-                        ctx.moveTo( p[0],  p[1] );
-                        index = 1;
-                        while (index < n)
-                        {
-                                var p0   = MathUtils.transformPoint( bezPts[index],  mat );
-                                var p1 = MathUtils.transformPoint( bezPts[index+1],  mat );
-
-                                var x0 = p0[0],  y0 = p0[1],
-                                        x1 = p1[0],  y1 = p1[1];
-                                ctx.quadraticCurveTo( x0,  y0,  x1, y1 );